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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 400 165

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 27 16

Repositories

Showing 10 of 524 repositories
  • aibs-informatics-cdk-lib Public

    Library for AWS CDK Constructs related to AIBS Informatics Services

    AllenInstitute/aibs-informatics-cdk-lib's past year of commit activity
    Python 1 0 1 7 Updated Oct 23, 2026
  • npc_lims Public

    Tools to fetch and update paths, metadata and state for Mindscope Neuropixels sessions, in the cloud.

    AllenInstitute/npc_lims's past year of commit activity
    Python 0 MIT 1 5 2 Updated Oct 23, 2026
  • MIES Public

    Multichannel Igor Electrophysiology Suite

    AllenInstitute/MIES's past year of commit activity
    IGOR Pro 30 11 295 8 Updated Oct 23, 2026
  • MultiTaskMPN Public
    AllenInstitute/MultiTaskMPN's past year of commit activity
    Python 2 2 0 0 Updated Oct 23, 2026
  • biodata-schema Public

    Complete and accurate metadata for bioscience

    AllenInstitute/biodata-schema's past year of commit activity
    Python 3 MIT 0 66 2 Updated Oct 23, 2026
  • Introduction_to_Neuroglancer Public

    Workshop material aimed to introduce scientists to using neuroglancer, especially for EM and LM data.

    AllenInstitute/Introduction_to_Neuroglancer's past year of commit activity
    Python 0 0 0 0 Updated Oct 23, 2026
  • biofile-finder Public

    An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

    AllenInstitute/biofile-finder's past year of commit activity
    TypeScript 22 BSD-3-Clause 10 53 5 Updated Oct 23, 2026
  • MERMAKE Public Forked from deprekate/MERMAKE

    Backend code for the MERFISH+ line of spatial transcriptomic microscopes

    AllenInstitute/MERMAKE's past year of commit activity
    Python 0 GPL-3.0 2 0 0 Updated Oct 22, 2026
  • bloom-preview Public
    AllenInstitute/bloom-preview's past year of commit activity
    HTML 0 0 0 0 Updated Oct 23, 2026
  • seaad_multiregion_trajectory_viewer Public

    Gene trajectory viewer for the SEA-AD multiregion data set.

    AllenInstitute/seaad_multiregion_trajectory_viewer's past year of commit activity
    R 0 0 1 0 Updated Oct 22, 2026
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